Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rdh1Q8CGV4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh1Q8CGV4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh1Q8CGV4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Gm40848-201ENSMUST00000221998 324 ntBASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh1Q8CGV4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 Smad6-203ENSMUST00000179458 273 ntBASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rdh1Q8CGV4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh1Q8CGV4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh1Q8CGV4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh1Q8CGV4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Gm43060-201ENSMUST00000200621 289 ntBASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rdh1Q8CGV4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rdh1Q8CGV4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rdh1Q8CGV4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms