Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rp1l1Q8CGM2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Rp1l1Q8CGM2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rp1l1Q8CGM2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rp1l1Q8CGM2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rp1l1Q8CGM2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rp1l1Q8CGM2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rp1l1Q8CGM2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rp1l1Q8CGM2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rp1l1Q8CGM2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rp1l1Q8CGM2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rp1l1Q8CGM2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rp1l1Q8CGM2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rp1l1Q8CGM2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rp1l1Q8CGM2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Gm20760-201ENSMUST00000179197 648 ntBASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rp1l1Q8CGM2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rp1l1Q8CGM2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rp1l1Q8CGM2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rp1l1Q8CGM2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rp1l1Q8CGM2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rp1l1Q8CGM2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rp1l1Q8CGM2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rp1l1Q8CGM2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.22■□□□□ 0.99
Rp1l1Q8CGM2 Mir7071-201ENSMUST00000184847 69 ntBASIC21.22■□□□□ 0.99
Rp1l1Q8CGM2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rp1l1Q8CGM2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rp1l1Q8CGM2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.21■□□□□ 0.99
Rp1l1Q8CGM2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.21■□□□□ 0.99
Rp1l1Q8CGM2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rp1l1Q8CGM2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rp1l1Q8CGM2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.2■□□□□ 0.98
Rp1l1Q8CGM2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rp1l1Q8CGM2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rp1l1Q8CGM2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rp1l1Q8CGM2 Gm22240-201ENSMUST00000175225 82 ntBASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rp1l1Q8CGM2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rp1l1Q8CGM2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms