Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Uba3Q8C878 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Uba3Q8C878 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Uba3Q8C878 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Uba3Q8C878 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.1■□□□□ 0.97
Uba3Q8C878 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uba3Q8C878 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Uba3Q8C878 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Uba3Q8C878 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.09■□□□□ 0.97
Uba3Q8C878 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.09■□□□□ 0.97
Uba3Q8C878 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uba3Q8C878 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uba3Q8C878 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uba3Q8C878 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uba3Q8C878 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Uba3Q8C878 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Uba3Q8C878 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.08■□□□□ 0.97
Uba3Q8C878 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Uba3Q8C878 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.08■□□□□ 0.97
Uba3Q8C878 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Uba3Q8C878 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Mir6236-201ENSMUST00000184437 123 ntBASIC21.07■□□□□ 0.96
Uba3Q8C878 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.07■□□□□ 0.96
Uba3Q8C878 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Uba3Q8C878 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Uba3Q8C878 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Uba3Q8C878 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Uba3Q8C878 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.06■□□□□ 0.96
Uba3Q8C878 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uba3Q8C878 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Uba3Q8C878 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Uba3Q8C878 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.05■□□□□ 0.96
Uba3Q8C878 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.05■□□□□ 0.96
Uba3Q8C878 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.05■□□□□ 0.96
Uba3Q8C878 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba3Q8C878 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.04■□□□□ 0.96
Uba3Q8C878 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.04■□□□□ 0.96
Uba3Q8C878 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba3Q8C878 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.04■□□□□ 0.96
Uba3Q8C878 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Uba3Q8C878 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba3Q8C878 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba3Q8C878 Gm43137-201ENSMUST00000198052 594 ntBASIC21.03■□□□□ 0.96
Uba3Q8C878 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.03■□□□□ 0.96
Uba3Q8C878 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba3Q8C878 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba3Q8C878 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba3Q8C878 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Uba3Q8C878 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.02■□□□□ 0.96
Uba3Q8C878 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Uba3Q8C878 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba3Q8C878 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Uba3Q8C878 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Uba3Q8C878 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Uba3Q8C878 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba3Q8C878 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms