Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap54Q8C6S9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Mir7071-201ENSMUST00000184847 69 ntBASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap54Q8C6S9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Gm22325-201ENSMUST00000158904 308 ntBASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cfap54Q8C6S9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cfap54Q8C6S9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Gm4968-201ENSMUST00000071458 858 ntBASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cfap54Q8C6S9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cfap54Q8C6S9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Cfap54Q8C6S9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Gm12441-201ENSMUST00000121806 588 ntBASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Gm22240-201ENSMUST00000175225 82 ntBASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cfap54Q8C6S9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms