Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.18■□□□□ 0.5
Col6a6Q8C6K9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.18■□□□□ 0.5
Col6a6Q8C6K9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Col6a6Q8C6K9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a6Q8C6K9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a6Q8C6K9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a6Q8C6K9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a6Q8C6K9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a6Q8C6K9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a6Q8C6K9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a6Q8C6K9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a6Q8C6K9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a6Q8C6K9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.11■□□□□ 0.49
Col6a6Q8C6K9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col6a6Q8C6K9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.09■□□□□ 0.49
Col6a6Q8C6K9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a6Q8C6K9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a6Q8C6K9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.09■□□□□ 0.49
Col6a6Q8C6K9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a6Q8C6K9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a6Q8C6K9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Col6a6Q8C6K9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a6Q8C6K9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Col6a6Q8C6K9 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.08■□□□□ 0.48
Col6a6Q8C6K9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col6a6Q8C6K9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a6Q8C6K9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a6Q8C6K9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms