Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.58■■□□□ 1.69
Ccdc60Q8C4J0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccdc60Q8C4J0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.58■■□□□ 1.69
Ccdc60Q8C4J0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccdc60Q8C4J0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
Ccdc60Q8C4J0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ccdc60Q8C4J0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
Ccdc60Q8C4J0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
Ccdc60Q8C4J0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25.56■■□□□ 1.68
Ccdc60Q8C4J0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Ccdc60Q8C4J0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.54■■□□□ 1.68
Ccdc60Q8C4J0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc60Q8C4J0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccdc60Q8C4J0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.53■■□□□ 1.68
Ccdc60Q8C4J0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Gm43137-201ENSMUST00000198052 594 ntBASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ccdc60Q8C4J0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.51■■□□□ 1.67
Ccdc60Q8C4J0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc60Q8C4J0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.51■■□□□ 1.67
Ccdc60Q8C4J0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
Ccdc60Q8C4J0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ccdc60Q8C4J0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ccdc60Q8C4J0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Ccdc60Q8C4J0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ccdc60Q8C4J0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ccdc60Q8C4J0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ccdc60Q8C4J0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms