Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sh3rf2Q8BZT2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh3rf2Q8BZT2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Sh3rf2Q8BZT2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf2Q8BZT2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf2Q8BZT2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf2Q8BZT2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3rf2Q8BZT2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf2Q8BZT2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf2Q8BZT2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3rf2Q8BZT2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3rf2Q8BZT2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3rf2Q8BZT2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3rf2Q8BZT2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh3rf2Q8BZT2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3rf2Q8BZT2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3rf2Q8BZT2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Gm11421-201ENSMUST00000122124 294 ntBASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3rf2Q8BZT2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3rf2Q8BZT2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3rf2Q8BZT2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3rf2Q8BZT2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3rf2Q8BZT2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.27■□□□□ 0.84
Sh3rf2Q8BZT2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3rf2Q8BZT2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3rf2Q8BZT2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3rf2Q8BZT2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms