Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lig4Q8BTF7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.21■□□□□ 0.99
Lig4Q8BTF7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lig4Q8BTF7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Gm12251-201ENSMUST00000117893 792 ntBASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Spcs1-204ENSMUST00000226782 949 ntBASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lig4Q8BTF7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.19■□□□□ 0.98
Lig4Q8BTF7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Serp2-204ENSMUST00000228055 705 ntBASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lig4Q8BTF7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lig4Q8BTF7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Gm43017-201ENSMUST00000198296 752 ntBASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Lig4Q8BTF7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lig4Q8BTF7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.14■□□□□ 0.98
Lig4Q8BTF7 Gm43173-201ENSMUST00000202246 593 ntBASIC21.14■□□□□ 0.97
Lig4Q8BTF7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lig4Q8BTF7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lig4Q8BTF7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lig4Q8BTF7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lig4Q8BTF7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Lig4Q8BTF7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms