Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ppp1r3eQ8BRJ4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ppp1r3eQ8BRJ4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ppp1r3eQ8BRJ4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ppp1r3eQ8BRJ4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ppp1r3eQ8BRJ4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ppp1r3eQ8BRJ4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ppp1r3eQ8BRJ4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ppp1r3eQ8BRJ4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ppp1r3eQ8BRJ4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ppp1r3eQ8BRJ4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ppp1r3eQ8BRJ4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ppp1r3eQ8BRJ4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms