Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Gm9847-201ENSMUST00000052528 599 ntBASIC20.38■□□□□ 0.85
Suds3Q8BR65 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.38■□□□□ 0.85
Suds3Q8BR65 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Suds3Q8BR65 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Suds3Q8BR65 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.36■□□□□ 0.85
Suds3Q8BR65 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Suds3Q8BR65 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Suds3Q8BR65 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.34■□□□□ 0.85
Suds3Q8BR65 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Suds3Q8BR65 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Suds3Q8BR65 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Suds3Q8BR65 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Suds3Q8BR65 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Suds3Q8BR65 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.31■□□□□ 0.84
Suds3Q8BR65 Gm13241-201ENSMUST00000094493 780 ntBASIC20.31■□□□□ 0.84
Suds3Q8BR65 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Suds3Q8BR65 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.3■□□□□ 0.84
Suds3Q8BR65 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Suds3Q8BR65 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.29■□□□□ 0.84
Suds3Q8BR65 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms