Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ckap4Q8BMK4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ckap4Q8BMK4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ckap4Q8BMK4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ckap4Q8BMK4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ckap4Q8BMK4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ckap4Q8BMK4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Gm40881-201ENSMUST00000223397 166 ntBASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.8■□□□□ 0.6
Ckap4Q8BMK4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.79■□□□□ 0.6
Ckap4Q8BMK4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Ckap4Q8BMK4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap4Q8BMK4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap4Q8BMK4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms