Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Mir6236-201ENSMUST00000184437 123 ntBASIC26.86■■□□□ 1.89
Col16a1Q8BLX7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.86■■□□□ 1.89
Col16a1Q8BLX7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col16a1Q8BLX7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC26.85■■□□□ 1.89
Col16a1Q8BLX7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Col16a1Q8BLX7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Col16a1Q8BLX7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Gm13234-201ENSMUST00000120010 747 ntBASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Col16a1Q8BLX7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Col16a1Q8BLX7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Col16a1Q8BLX7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.82■■□□□ 1.88
Col16a1Q8BLX7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC26.82■■□□□ 1.88
Col16a1Q8BLX7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Reep4-203ENSMUST00000226563 1444 ntBASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Col16a1Q8BLX7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Nespas-201ENSMUST00000143738 1083 ntBASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Gm10653-202ENSMUST00000139570 835 ntBASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.8■■□□□ 1.88
Col16a1Q8BLX7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
Col16a1Q8BLX7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Col16a1Q8BLX7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Gm9988-201ENSMUST00000069786 435 ntBASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Col16a1Q8BLX7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
Col16a1Q8BLX7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Col16a1Q8BLX7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Col16a1Q8BLX7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Col16a1Q8BLX7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Col16a1Q8BLX7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col16a1Q8BLX7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Col16a1Q8BLX7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Col16a1Q8BLX7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.73■■□□□ 1.87
Col16a1Q8BLX7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Col16a1Q8BLX7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Col16a1Q8BLX7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Gm12441-201ENSMUST00000121806 588 ntBASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col16a1Q8BLX7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col16a1Q8BLX7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Col16a1Q8BLX7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.7■■□□□ 1.87
Col16a1Q8BLX7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Col16a1Q8BLX7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col16a1Q8BLX7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC26.7■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms