Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Terc-201ENSMUST00000082862 423 ntBASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkl3Q8BLF2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl3Q8BLF2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkl3Q8BLF2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cdkl3Q8BLF2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkl3Q8BLF2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkl3Q8BLF2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl3Q8BLF2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl3Q8BLF2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl3Q8BLF2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl3Q8BLF2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkl3Q8BLF2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkl3Q8BLF2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdkl3Q8BLF2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms