Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr3Q8BL00 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr3Q8BL00 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr3Q8BL00 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Gm5921-201ENSMUST00000075898 882 ntBASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdhr3Q8BL00 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr3Q8BL00 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdhr3Q8BL00 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdhr3Q8BL00 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdhr3Q8BL00 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Gm10232-201ENSMUST00000089221 720 ntBASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdhr3Q8BL00 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms