Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pum3Q8BKS9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Gm43137-201ENSMUST00000198052 594 ntBASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pum3Q8BKS9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pum3Q8BKS9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pum3Q8BKS9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.18■□□□□ 0.98
Pum3Q8BKS9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.18■□□□□ 0.98
Pum3Q8BKS9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pum3Q8BKS9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pum3Q8BKS9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.18■□□□□ 0.98
Pum3Q8BKS9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pum3Q8BKS9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pum3Q8BKS9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pum3Q8BKS9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pum3Q8BKS9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pum3Q8BKS9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pum3Q8BKS9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.14■□□□□ 0.98
Pum3Q8BKS9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pum3Q8BKS9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pum3Q8BKS9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pum3Q8BKS9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.14■□□□□ 0.97
Pum3Q8BKS9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.14■□□□□ 0.97
Pum3Q8BKS9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pum3Q8BKS9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pum3Q8BKS9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pum3Q8BKS9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pum3Q8BKS9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pum3Q8BKS9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pum3Q8BKS9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pum3Q8BKS9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms