Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tdp1Q8BJ37 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Tdp1Q8BJ37 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tdp1Q8BJ37 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tdp1Q8BJ37 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.24■■□□□ 1.15
Tdp1Q8BJ37 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tdp1Q8BJ37 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tdp1Q8BJ37 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Gm9988-201ENSMUST00000069786 435 ntBASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tdp1Q8BJ37 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tdp1Q8BJ37 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tdp1Q8BJ37 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tdp1Q8BJ37 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tdp1Q8BJ37 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tdp1Q8BJ37 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tdp1Q8BJ37 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Tdp1Q8BJ37 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tdp1Q8BJ37 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.16■■□□□ 1.14
Tdp1Q8BJ37 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tdp1Q8BJ37 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Tdp1Q8BJ37 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Tdp1Q8BJ37 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tdp1Q8BJ37 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms