Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SynbQ8BI41 Gm43173-201ENSMUST00000202246 593 ntBASIC18.99■□□□□ 0.63
SynbQ8BI41 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SynbQ8BI41 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.98■□□□□ 0.63
SynbQ8BI41 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SynbQ8BI41 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SynbQ8BI41 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SynbQ8BI41 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.97■□□□□ 0.63
SynbQ8BI41 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SynbQ8BI41 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SynbQ8BI41 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SynbQ8BI41 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SynbQ8BI41 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SynbQ8BI41 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SynbQ8BI41 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SynbQ8BI41 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SynbQ8BI41 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SynbQ8BI41 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SynbQ8BI41 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SynbQ8BI41 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SynbQ8BI41 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SynbQ8BI41 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SynbQ8BI41 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SynbQ8BI41 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SynbQ8BI41 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SynbQ8BI41 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.94■□□□□ 0.62
SynbQ8BI41 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SynbQ8BI41 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SynbQ8BI41 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.94■□□□□ 0.62
SynbQ8BI41 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SynbQ8BI41 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SynbQ8BI41 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.93■□□□□ 0.62
SynbQ8BI41 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SynbQ8BI41 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SynbQ8BI41 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.92■□□□□ 0.62
SynbQ8BI41 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SynbQ8BI41 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SynbQ8BI41 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SynbQ8BI41 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SynbQ8BI41 Gm12251-201ENSMUST00000117893 792 ntBASIC18.91■□□□□ 0.62
SynbQ8BI41 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SynbQ8BI41 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.9■□□□□ 0.62
SynbQ8BI41 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.9■□□□□ 0.62
SynbQ8BI41 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.9■□□□□ 0.62
SynbQ8BI41 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SynbQ8BI41 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SynbQ8BI41 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms