Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3bQ8BHK2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3bQ8BHK2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3bQ8BHK2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3bQ8BHK2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3bQ8BHK2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3bQ8BHK2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3bQ8BHK2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3bQ8BHK2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn3bQ8BHK2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn3bQ8BHK2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn3bQ8BHK2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn3bQ8BHK2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn3bQ8BHK2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn3bQ8BHK2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn3bQ8BHK2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn3bQ8BHK2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn3bQ8BHK2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Scn3bQ8BHK2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Scn3bQ8BHK2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn3bQ8BHK2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms