Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc5a7Q8BGY9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc5a7Q8BGY9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc5a7Q8BGY9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Slc5a7Q8BGY9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.52■□□□□ 0.39
Slc5a7Q8BGY9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc5a7Q8BGY9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc5a7Q8BGY9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc5a7Q8BGY9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc5a7Q8BGY9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc5a7Q8BGY9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc5a7Q8BGY9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Slc5a7Q8BGY9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc5a7Q8BGY9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc5a7Q8BGY9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc5a7Q8BGY9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms