Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim6Q8BGE7 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.17■□□□□ 0.98
Trim6Q8BGE7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim6Q8BGE7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim6Q8BGE7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.17■□□□□ 0.98
Trim6Q8BGE7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim6Q8BGE7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.16■□□□□ 0.98
Trim6Q8BGE7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim6Q8BGE7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim6Q8BGE7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim6Q8BGE7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim6Q8BGE7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim6Q8BGE7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim6Q8BGE7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Gm45444-201ENSMUST00000211394 898 ntBASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim6Q8BGE7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.11■□□□□ 0.97
Trim6Q8BGE7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim6Q8BGE7 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim6Q8BGE7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim6Q8BGE7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms