Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc116Q80X53 Etf1-202ENSMUST00000180351 108 ntBASIC19.65■□□□□ 0.74
Ccdc116Q80X53 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.65■□□□□ 0.74
Ccdc116Q80X53 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc116Q80X53 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc116Q80X53 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc116Q80X53 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc116Q80X53 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc116Q80X53 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc116Q80X53 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc116Q80X53 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc116Q80X53 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc116Q80X53 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Gm22238-201ENSMUST00000175222 88 ntBASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Gm43530-201ENSMUST00000195920 274 ntBASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc116Q80X53 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc116Q80X53 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc116Q80X53 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc116Q80X53 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc116Q80X53 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc116Q80X53 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ccdc116Q80X53 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc116Q80X53 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc116Q80X53 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc116Q80X53 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc116Q80X53 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms