Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.22■□□□□ 0.67
Trim36Q80WG7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.22■□□□□ 0.67
Trim36Q80WG7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim36Q80WG7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim36Q80WG7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim36Q80WG7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim36Q80WG7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.2■□□□□ 0.66
Trim36Q80WG7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.19■□□□□ 0.66
Trim36Q80WG7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim36Q80WG7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim36Q80WG7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim36Q80WG7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.18■□□□□ 0.66
Trim36Q80WG7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim36Q80WG7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.17■□□□□ 0.66
Trim36Q80WG7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim36Q80WG7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim36Q80WG7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim36Q80WG7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms