Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnrc18Q80WC3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tnrc18Q80WC3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.39■□□□□ 0.85
Tnrc18Q80WC3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc18Q80WC3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc18Q80WC3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc18Q80WC3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc18Q80WC3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc18Q80WC3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc18Q80WC3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Gm8520-201ENSMUST00000186517 868 ntBASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Gm20049-201ENSMUST00000219950 730 ntBASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc18Q80WC3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Gm7514-201ENSMUST00000209475 934 ntBASIC20.35■□□□□ 0.85
Tnrc18Q80WC3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Gm37856-201ENSMUST00000191634 999 ntBASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnrc18Q80WC3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnrc18Q80WC3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnrc18Q80WC3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnrc18Q80WC3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnrc18Q80WC3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnrc18Q80WC3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Gm9988-201ENSMUST00000069786 435 ntBASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnrc18Q80WC3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tnrc18Q80WC3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 Gm7977-201ENSMUST00000193787 748 ntBASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnrc18Q80WC3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnrc18Q80WC3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 1579.5 ms