Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf40bQ80W14 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf40bQ80W14 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Prpf40bQ80W14 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Prpf40bQ80W14 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf40bQ80W14 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Prpf40bQ80W14 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Prpf40bQ80W14 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.08■■□□□ 1.28
Prpf40bQ80W14 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Gm18671-201ENSMUST00000214826 683 ntBASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf40bQ80W14 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Spcs1-204ENSMUST00000226782 949 ntBASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf40bQ80W14 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf40bQ80W14 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.04■■□□□ 1.28
Prpf40bQ80W14 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.03■■□□□ 1.28
Prpf40bQ80W14 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Prpf40bQ80W14 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.01■■□□□ 1.27
Prpf40bQ80W14 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23■■□□□ 1.27
Prpf40bQ80W14 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23■■□□□ 1.27
Prpf40bQ80W14 AV356131-201ENSMUST00000206201 750 ntBASIC23■■□□□ 1.27
Prpf40bQ80W14 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23■■□□□ 1.27
Prpf40bQ80W14 Gm7143-201ENSMUST00000222811 859 ntBASIC23■■□□□ 1.27
Prpf40bQ80W14 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23■■□□□ 1.27
Prpf40bQ80W14 Hsf1-207ENSMUST00000228371 2102 ntBASIC23■■□□□ 1.27
Prpf40bQ80W14 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23■■□□□ 1.27
Prpf40bQ80W14 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Prpf40bQ80W14 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Prpf40bQ80W14 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Prpf40bQ80W14 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Prpf40bQ80W14 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Prpf40bQ80W14 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Prpf40bQ80W14 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Prpf40bQ80W14 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
Prpf40bQ80W14 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Gm10033-202ENSMUST00000211874 928 ntBASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Prpf40bQ80W14 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms