Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps13bQ80TY5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps13bQ80TY5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps13bQ80TY5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps13bQ80TY5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps13bQ80TY5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.21□□□□□ -0.45
Vps13bQ80TY5 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps13bQ80TY5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps13bQ80TY5 Gm5408-201ENSMUST00000197998 747 ntBASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Mir6982-201ENSMUST00000184354 68 ntBASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Gm715-201ENSMUST00000117865 831 ntBASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.2□□□□□ -0.46
Vps13bQ80TY5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Gm26524-201ENSMUST00000192339 390 ntBASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.19□□□□□ -0.46
Vps13bQ80TY5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vps13bQ80TY5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Gm8520-201ENSMUST00000186517 868 ntBASIC12.18□□□□□ -0.46
Vps13bQ80TY5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps13bQ80TY5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps13bQ80TY5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms