Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cspg5Q71M36 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Gm10849-201ENSMUST00000100397 618 ntBASIC20.62■□□□□ 0.89
Cspg5Q71M36 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.62■□□□□ 0.89
Cspg5Q71M36 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Gm43060-201ENSMUST00000200621 289 ntBASIC20.62■□□□□ 0.89
Cspg5Q71M36 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Gm7143-201ENSMUST00000222811 859 ntBASIC20.62■□□□□ 0.89
Cspg5Q71M36 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cspg5Q71M36 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.62■□□□□ 0.89
Cspg5Q71M36 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.61■□□□□ 0.89
Cspg5Q71M36 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.61■□□□□ 0.89
Cspg5Q71M36 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cspg5Q71M36 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cspg5Q71M36 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.59■□□□□ 0.89
Cspg5Q71M36 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cspg5Q71M36 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cspg5Q71M36 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.59■□□□□ 0.89
Cspg5Q71M36 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.59■□□□□ 0.89
Cspg5Q71M36 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.59■□□□□ 0.89
Cspg5Q71M36 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.59■□□□□ 0.89
Cspg5Q71M36 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cspg5Q71M36 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cspg5Q71M36 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cspg5Q71M36 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Gm42642-201ENSMUST00000200683 355 ntBASIC20.58■□□□□ 0.89
Cspg5Q71M36 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cspg5Q71M36 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cspg5Q71M36 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.57■□□□□ 0.88
Cspg5Q71M36 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cspg5Q71M36 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Cspg5Q71M36 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Gm27405-201ENSMUST00000184201 112 ntBASIC20.56■□□□□ 0.88
Cspg5Q71M36 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cspg5Q71M36 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.56■□□□□ 0.88
Cspg5Q71M36 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Spcs1-204ENSMUST00000226782 949 ntBASIC20.55■□□□□ 0.88
Cspg5Q71M36 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Gm10493-201ENSMUST00000097270 612 ntBASIC20.55■□□□□ 0.88
Cspg5Q71M36 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Cspg5Q71M36 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cspg5Q71M36 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.54■□□□□ 0.88
Cspg5Q71M36 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cspg5Q71M36 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms