Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm1aQ6ZQ88 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm1aQ6ZQ88 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kdm1aQ6ZQ88 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Kdm1aQ6ZQ88 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm1aQ6ZQ88 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kdm1aQ6ZQ88 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Kdm1aQ6ZQ88 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kdm1aQ6ZQ88 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Kdm1aQ6ZQ88 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Kdm1aQ6ZQ88 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Gm9959-201ENSMUST00000068277 390 ntBASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Kdm1aQ6ZQ88 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Kdm1aQ6ZQ88 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Kdm1aQ6ZQ88 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Kdm1aQ6ZQ88 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Gm43530-201ENSMUST00000195920 274 ntBASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.08■■□□□ 1.13
Kdm1aQ6ZQ88 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Kdm1aQ6ZQ88 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Kdm1aQ6ZQ88 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Kdm1aQ6ZQ88 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kdm1aQ6ZQ88 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Kdm1aQ6ZQ88 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.07■■□□□ 1.12
Kdm1aQ6ZQ88 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Kdm1aQ6ZQ88 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Kdm1aQ6ZQ88 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Kdm1aQ6ZQ88 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1aQ6ZQ88 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Kdm1aQ6ZQ88 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1aQ6ZQ88 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Kdm1aQ6ZQ88 Mir6236-201ENSMUST00000184437 123 ntBASIC22.05■■□□□ 1.12
Kdm1aQ6ZQ88 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms