Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Gm13148-201ENSMUST00000118892 745 ntBASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Scn10aQ6QIY3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Scn10aQ6QIY3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Scn10aQ6QIY3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Gm7514-201ENSMUST00000209475 934 ntBASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Scn10aQ6QIY3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scn10aQ6QIY3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Mir5133-201ENSMUST00000174955 77 ntBASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scn10aQ6QIY3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scn10aQ6QIY3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Scn10aQ6QIY3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Scn10aQ6QIY3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Scn10aQ6QIY3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scn10aQ6QIY3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scn10aQ6QIY3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scn10aQ6QIY3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scn10aQ6QIY3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Scn10aQ6QIY3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Scn10aQ6QIY3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Scn10aQ6QIY3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scn10aQ6QIY3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Scn10aQ6QIY3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scn10aQ6QIY3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Gm13146-201ENSMUST00000118508 780 ntBASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scn10aQ6QIY3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scn10aQ6QIY3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Scn10aQ6QIY3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms