Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snrnp40Q6PE01 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.74■□□□□ 0.43
Snrnp40Q6PE01 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.73■□□□□ 0.43
Snrnp40Q6PE01 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp40Q6PE01 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp40Q6PE01 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Snrnp40Q6PE01 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp40Q6PE01 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.71■□□□□ 0.43
Snrnp40Q6PE01 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp40Q6PE01 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.71■□□□□ 0.42
Snrnp40Q6PE01 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp40Q6PE01 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Gm27801-201ENSMUST00000184174 223 ntBASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Gm7514-201ENSMUST00000209475 934 ntBASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp40Q6PE01 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp40Q6PE01 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp40Q6PE01 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Snrnp40Q6PE01 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms