Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Chd4Q6PDQ2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Chd4Q6PDQ2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Chd4Q6PDQ2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC26.64■■□□□ 1.86
Chd4Q6PDQ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Chd4Q6PDQ2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Chd4Q6PDQ2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Chd4Q6PDQ2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Chd4Q6PDQ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Chd4Q6PDQ2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 Gm18671-201ENSMUST00000214826 683 ntBASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Chd4Q6PDQ2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
Chd4Q6PDQ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Chd4Q6PDQ2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Chd4Q6PDQ2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Chd4Q6PDQ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Chd4Q6PDQ2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC26.56■■□□□ 1.84
Chd4Q6PDQ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC26.56■■□□□ 1.84
Chd4Q6PDQ2 Reep4-203ENSMUST00000226563 1444 ntBASIC26.56■■□□□ 1.84
Chd4Q6PDQ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Chd4Q6PDQ2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Chd4Q6PDQ2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Chd4Q6PDQ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC26.54■■□□□ 1.84
Chd4Q6PDQ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Chd4Q6PDQ2 Gm13234-201ENSMUST00000120010 747 ntBASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms