Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC31.54■■■□□ 2.64
Slx4Q6P1D7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Slx4Q6P1D7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Gm4968-201ENSMUST00000071458 858 ntBASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Slx4Q6P1D7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC31.52■■■□□ 2.64
Slx4Q6P1D7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC31.52■■■□□ 2.64
Slx4Q6P1D7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slx4Q6P1D7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slx4Q6P1D7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Slx4Q6P1D7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.64
Slx4Q6P1D7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Slx4Q6P1D7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC31.5■■■□□ 2.63
Slx4Q6P1D7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Slx4Q6P1D7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Slx4Q6P1D7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Slx4Q6P1D7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slx4Q6P1D7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Gm27801-201ENSMUST00000184174 223 ntBASIC31.47■■■□□ 2.63
Slx4Q6P1D7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC31.47■■■□□ 2.63
Slx4Q6P1D7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Slx4Q6P1D7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Slx4Q6P1D7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Slx4Q6P1D7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Slx4Q6P1D7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
Slx4Q6P1D7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Slx4Q6P1D7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.45■■■□□ 2.63
Slx4Q6P1D7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Slx4Q6P1D7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
Slx4Q6P1D7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Slx4Q6P1D7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slx4Q6P1D7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Gm12527-201ENSMUST00000117967 564 ntBASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slx4Q6P1D7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC31.42■■■□□ 2.62
Slx4Q6P1D7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slx4Q6P1D7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Slx4Q6P1D7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Slx4Q6P1D7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Slx4Q6P1D7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Slx4Q6P1D7 Mir5133-201ENSMUST00000174955 77 ntBASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Gm7514-201ENSMUST00000209475 934 ntBASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Gm10252-201ENSMUST00000209541 832 ntBASIC31.39■■■□□ 2.62
Slx4Q6P1D7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Slx4Q6P1D7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.61
Slx4Q6P1D7 Gm13148-201ENSMUST00000118892 745 ntBASIC31.39■■■□□ 2.61
Slx4Q6P1D7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
Slx4Q6P1D7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Slx4Q6P1D7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Slx4Q6P1D7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Slx4Q6P1D7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Slx4Q6P1D7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Slx4Q6P1D7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms