Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.17■□□□□ 0.66
Sdc3Q64519 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sdc3Q64519 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sdc3Q64519 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sdc3Q64519 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdc3Q64519 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sdc3Q64519 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc3Q64519 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdc3Q64519 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sdc3Q64519 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sdc3Q64519 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.14■□□□□ 0.65
Sdc3Q64519 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.14■□□□□ 0.65
Sdc3Q64519 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.14■□□□□ 0.65
Sdc3Q64519 Serp2-204ENSMUST00000228055 705 ntBASIC19.14■□□□□ 0.65
Sdc3Q64519 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sdc3Q64519 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdc3Q64519 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sdc3Q64519 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc3Q64519 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Sdc3Q64519 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.13■□□□□ 0.65
Sdc3Q64519 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.13■□□□□ 0.65
Sdc3Q64519 Mir7075-201ENSMUST00000184187 82 ntBASIC19.13■□□□□ 0.65
Sdc3Q64519 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc3Q64519 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sdc3Q64519 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sdc3Q64519 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc3Q64519 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sdc3Q64519 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc3Q64519 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc3Q64519 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sdc3Q64519 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sdc3Q64519 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sdc3Q64519 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.12■□□□□ 0.65
Sdc3Q64519 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.12■□□□□ 0.65
Sdc3Q64519 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc3Q64519 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc3Q64519 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdc3Q64519 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc3Q64519 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc3Q64519 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdc3Q64519 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.11■□□□□ 0.65
Sdc3Q64519 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.1■□□□□ 0.65
Sdc3Q64519 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sdc3Q64519 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sdc3Q64519 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sdc3Q64519 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.09■□□□□ 0.65
Sdc3Q64519 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sdc3Q64519 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Gm6139-201ENSMUST00000079261 882 ntBASIC19.09■□□□□ 0.65
Sdc3Q64519 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sdc3Q64519 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sdc3Q64519 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdc3Q64519 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc3Q64519 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Sdc3Q64519 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc3Q64519 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc3Q64519 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdc3Q64519 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc3Q64519 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc3Q64519 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.08■□□□□ 0.64
Sdc3Q64519 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.08■□□□□ 0.64
Sdc3Q64519 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.08■□□□□ 0.64
Sdc3Q64519 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms