Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scnn1aQ61180 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Scnn1aQ61180 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Gm10493-201ENSMUST00000097270 612 ntBASIC23.21■■□□□ 1.31
Scnn1aQ61180 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Scnn1aQ61180 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.2■■□□□ 1.3
Scnn1aQ61180 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scnn1aQ61180 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scnn1aQ61180 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scnn1aQ61180 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.19■■□□□ 1.3
Scnn1aQ61180 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.19■■□□□ 1.3
Scnn1aQ61180 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scnn1aQ61180 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Scnn1aQ61180 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scnn1aQ61180 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scnn1aQ61180 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.18■■□□□ 1.3
Scnn1aQ61180 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.18■■□□□ 1.3
Scnn1aQ61180 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Scnn1aQ61180 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.18■■□□□ 1.3
Scnn1aQ61180 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Scnn1aQ61180 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scnn1aQ61180 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scnn1aQ61180 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scnn1aQ61180 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.16■■□□□ 1.3
Scnn1aQ61180 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scnn1aQ61180 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scnn1aQ61180 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scnn1aQ61180 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Scnn1aQ61180 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.15■■□□□ 1.3
Scnn1aQ61180 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scnn1aQ61180 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scnn1aQ61180 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Scnn1aQ61180 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Scnn1aQ61180 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scnn1aQ61180 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.14■■□□□ 1.29
Scnn1aQ61180 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scnn1aQ61180 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scnn1aQ61180 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Scnn1aQ61180 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scnn1aQ61180 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.12■■□□□ 1.29
Scnn1aQ61180 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.12■■□□□ 1.29
Scnn1aQ61180 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.12■■□□□ 1.29
Scnn1aQ61180 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
Scnn1aQ61180 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scnn1aQ61180 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.11■■□□□ 1.29
Scnn1aQ61180 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Scnn1aQ61180 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Scnn1aQ61180 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Scnn1aQ61180 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Scnn1aQ61180 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms