Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.42■□□□□ 0.7
Trpc1Q61056 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trpc1Q61056 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.41■□□□□ 0.7
Trpc1Q61056 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpc1Q61056 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trpc1Q61056 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trpc1Q61056 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trpc1Q61056 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Trpc1Q61056 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.4■□□□□ 0.7
Trpc1Q61056 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trpc1Q61056 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trpc1Q61056 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.39■□□□□ 0.7
Trpc1Q61056 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trpc1Q61056 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trpc1Q61056 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpc1Q61056 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpc1Q61056 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trpc1Q61056 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpc1Q61056 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpc1Q61056 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trpc1Q61056 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trpc1Q61056 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.38■□□□□ 0.69
Trpc1Q61056 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpc1Q61056 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpc1Q61056 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpc1Q61056 Gm10232-201ENSMUST00000089221 720 ntBASIC19.38■□□□□ 0.69
Trpc1Q61056 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trpc1Q61056 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpc1Q61056 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trpc1Q61056 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.37■□□□□ 0.69
Trpc1Q61056 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.37■□□□□ 0.69
Trpc1Q61056 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpc1Q61056 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trpc1Q61056 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpc1Q61056 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpc1Q61056 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpc1Q61056 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpc1Q61056 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.36■□□□□ 0.69
Trpc1Q61056 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trpc1Q61056 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpc1Q61056 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trpc1Q61056 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trpc1Q61056 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trpc1Q61056 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpc1Q61056 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.34■□□□□ 0.69
Trpc1Q61056 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Rps24-207ENSMUST00000224568 714 ntBASIC19.34■□□□□ 0.69
Trpc1Q61056 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.34■□□□□ 0.69
Trpc1Q61056 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trpc1Q61056 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpc1Q61056 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpc1Q61056 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpc1Q61056 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trpc1Q61056 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpc1Q61056 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpc1Q61056 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpc1Q61056 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpc1Q61056 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpc1Q61056 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpc1Q61056 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpc1Q61056 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.32■□□□□ 0.68
Trpc1Q61056 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.32■□□□□ 0.68
Trpc1Q61056 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms