Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Slc6a4Q60857 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slc6a4Q60857 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Slc6a4Q60857 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Slc6a4Q60857 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a4Q60857 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a4Q60857 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a4Q60857 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a4Q60857 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.57■□□□□ 0.88
Slc6a4Q60857 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a4Q60857 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a4Q60857 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a4Q60857 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a4Q60857 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a4Q60857 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a4Q60857 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a4Q60857 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.55■□□□□ 0.88
Slc6a4Q60857 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Slc6a4Q60857 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a4Q60857 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a4Q60857 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.54■□□□□ 0.88
Slc6a4Q60857 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a4Q60857 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Slc6a4Q60857 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.53■□□□□ 0.88
Slc6a4Q60857 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Smad6-203ENSMUST00000179458 273 ntBASIC20.53■□□□□ 0.88
Slc6a4Q60857 Gm26833-201ENSMUST00000180899 440 ntBASIC20.53■□□□□ 0.88
Slc6a4Q60857 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.53■□□□□ 0.88
Slc6a4Q60857 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.53■□□□□ 0.88
Slc6a4Q60857 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc6a4Q60857 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a4Q60857 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a4Q60857 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a4Q60857 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc6a4Q60857 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Gm40848-201ENSMUST00000221998 324 ntBASIC20.51■□□□□ 0.87
Slc6a4Q60857 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a4Q60857 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a4Q60857 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a4Q60857 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc6a4Q60857 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms