Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ripk1Q60855 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ripk1Q60855 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ripk1Q60855 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ripk1Q60855 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ripk1Q60855 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ripk1Q60855 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ripk1Q60855 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ripk1Q60855 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.83■□□□□ 0.6
Ripk1Q60855 Gm14117-201ENSMUST00000122417 843 ntBASIC18.83■□□□□ 0.6
Ripk1Q60855 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.83■□□□□ 0.6
Ripk1Q60855 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ripk1Q60855 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ripk1Q60855 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ripk1Q60855 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ripk1Q60855 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ripk1Q60855 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.82■□□□□ 0.6
Ripk1Q60855 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ripk1Q60855 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
Ripk1Q60855 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.82■□□□□ 0.6
Ripk1Q60855 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ripk1Q60855 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.82■□□□□ 0.6
Ripk1Q60855 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ripk1Q60855 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ripk1Q60855 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ripk1Q60855 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ripk1Q60855 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Ripk1Q60855 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.81■□□□□ 0.6
Ripk1Q60855 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Ripk1Q60855 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ripk1Q60855 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ripk1Q60855 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ripk1Q60855 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ripk1Q60855 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ripk1Q60855 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ripk1Q60855 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ripk1Q60855 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.79■□□□□ 0.6
Ripk1Q60855 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Ripk1Q60855 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.79■□□□□ 0.6
Ripk1Q60855 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ripk1Q60855 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ripk1Q60855 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.78■□□□□ 0.6
Ripk1Q60855 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
Ripk1Q60855 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.78■□□□□ 0.6
Ripk1Q60855 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.78■□□□□ 0.6
Ripk1Q60855 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ripk1Q60855 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ripk1Q60855 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ripk1Q60855 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.77■□□□□ 0.6
Ripk1Q60855 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.77■□□□□ 0.6
Ripk1Q60855 Gm43530-201ENSMUST00000195920 274 ntBASIC18.77■□□□□ 0.6
Ripk1Q60855 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ripk1Q60855 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ripk1Q60855 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ripk1Q60855 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ripk1Q60855 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ripk1Q60855 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ripk1Q60855 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms