Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
ClpbQ60649 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.17■□□□□ 0.66
ClpbQ60649 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.17■□□□□ 0.66
ClpbQ60649 Gm7143-201ENSMUST00000222811 859 ntBASIC19.17■□□□□ 0.66
ClpbQ60649 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ClpbQ60649 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ClpbQ60649 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
ClpbQ60649 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.16■□□□□ 0.66
ClpbQ60649 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ClpbQ60649 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.16■□□□□ 0.66
ClpbQ60649 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ClpbQ60649 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ClpbQ60649 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpbQ60649 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpbQ60649 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpbQ60649 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ClpbQ60649 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ClpbQ60649 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.14■□□□□ 0.65
ClpbQ60649 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.14■□□□□ 0.65
ClpbQ60649 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.14■□□□□ 0.65
ClpbQ60649 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ClpbQ60649 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.13■□□□□ 0.65
ClpbQ60649 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.13■□□□□ 0.65
ClpbQ60649 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ClpbQ60649 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ClpbQ60649 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.13■□□□□ 0.65
ClpbQ60649 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ClpbQ60649 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.13■□□□□ 0.65
ClpbQ60649 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ClpbQ60649 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.13■□□□□ 0.65
ClpbQ60649 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClpbQ60649 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClpbQ60649 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClpbQ60649 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.12■□□□□ 0.65
ClpbQ60649 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ClpbQ60649 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ClpbQ60649 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ClpbQ60649 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ClpbQ60649 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.11■□□□□ 0.65
ClpbQ60649 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.11■□□□□ 0.65
ClpbQ60649 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ClpbQ60649 Gm12821-201ENSMUST00000120022 600 ntBASIC19.11■□□□□ 0.65
ClpbQ60649 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.11■□□□□ 0.65
ClpbQ60649 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.11■□□□□ 0.65
ClpbQ60649 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.11■□□□□ 0.65
ClpbQ60649 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ClpbQ60649 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClpbQ60649 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ClpbQ60649 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ClpbQ60649 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClpbQ60649 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClpbQ60649 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ClpbQ60649 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ClpbQ60649 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.1■□□□□ 0.65
ClpbQ60649 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ClpbQ60649 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ClpbQ60649 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.1■□□□□ 0.65
ClpbQ60649 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClpbQ60649 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClpbQ60649 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClpbQ60649 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClpbQ60649 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ClpbQ60649 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.09■□□□□ 0.65
ClpbQ60649 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.09■□□□□ 0.65
ClpbQ60649 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms