Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Gm45444-201ENSMUST00000211394 898 ntBASIC19.05■□□□□ 0.64
Nr1h4Q60641 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nr1h4Q60641 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1h4Q60641 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1h4Q60641 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h4Q60641 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.03■□□□□ 0.64
Nr1h4Q60641 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h4Q60641 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h4Q60641 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h4Q60641 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h4Q60641 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h4Q60641 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.02■□□□□ 0.63
Nr1h4Q60641 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h4Q60641 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h4Q60641 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nr1h4Q60641 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nr1h4Q60641 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nr1h4Q60641 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nr1h4Q60641 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nr1h4Q60641 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h4Q60641 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.99■□□□□ 0.63
Nr1h4Q60641 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h4Q60641 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h4Q60641 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h4Q60641 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr1h4Q60641 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nr1h4Q60641 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms