Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp13a4Q5XF90 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Atp13a4Q5XF90 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atp13a4Q5XF90 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Atp13a4Q5XF90 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atp13a4Q5XF90 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atp13a4Q5XF90 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atp13a4Q5XF90 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Atp13a4Q5XF90 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Mir6236-201ENSMUST00000184437 123 ntBASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Atp13a4Q5XF90 Gm21956-201ENSMUST00000179946 522 ntBASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atp13a4Q5XF90 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.64■■□□□ 1.06
Atp13a4Q5XF90 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atp13a4Q5XF90 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atp13a4Q5XF90 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Atp13a4Q5XF90 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.64■■□□□ 1.05
Atp13a4Q5XF90 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atp13a4Q5XF90 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
Atp13a4Q5XF90 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Atp13a4Q5XF90 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp13a4Q5XF90 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.6■■□□□ 1.05
Atp13a4Q5XF90 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Atp13a4Q5XF90 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms