Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim38Q5SZ99 Mir6236-201ENSMUST00000184437 123 ntBASIC20.76■□□□□ 0.91
Trim38Q5SZ99 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim38Q5SZ99 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim38Q5SZ99 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim38Q5SZ99 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim38Q5SZ99 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim38Q5SZ99 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim38Q5SZ99 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim38Q5SZ99 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim38Q5SZ99 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim38Q5SZ99 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Gm14117-201ENSMUST00000122417 843 ntBASIC20.73■□□□□ 0.91
Trim38Q5SZ99 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim38Q5SZ99 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim38Q5SZ99 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim38Q5SZ99 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.91
Trim38Q5SZ99 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim38Q5SZ99 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim38Q5SZ99 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim38Q5SZ99 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim38Q5SZ99 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms