Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Urb1Q571H0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Urb1Q571H0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Urb1Q571H0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Urb1Q571H0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Urb1Q571H0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Urb1Q571H0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Urb1Q571H0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.42■□□□□ 0.54
Urb1Q571H0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Urb1Q571H0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Urb1Q571H0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.41■□□□□ 0.54
Urb1Q571H0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.41■□□□□ 0.54
Urb1Q571H0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Urb1Q571H0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Urb1Q571H0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Urb1Q571H0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.4■□□□□ 0.54
Urb1Q571H0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Urb1Q571H0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Urb1Q571H0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.39■□□□□ 0.54
Urb1Q571H0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Urb1Q571H0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Urb1Q571H0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Urb1Q571H0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Urb1Q571H0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.39■□□□□ 0.53
Urb1Q571H0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Urb1Q571H0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Reep4-203ENSMUST00000226563 1444 ntBASIC18.38■□□□□ 0.53
Urb1Q571H0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Urb1Q571H0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.37■□□□□ 0.53
Urb1Q571H0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Urb1Q571H0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Urb1Q571H0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.37■□□□□ 0.53
Urb1Q571H0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Urb1Q571H0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.36■□□□□ 0.53
Urb1Q571H0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Urb1Q571H0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Urb1Q571H0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Urb1Q571H0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.36■□□□□ 0.53
Urb1Q571H0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
Urb1Q571H0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.35■□□□□ 0.53
Urb1Q571H0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Urb1Q571H0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms