Protein–RNA interactions for Protein: Q3V3R4

Itga1, Integrin alpha-1, mousemouse

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itga1Q3V3R4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itga1Q3V3R4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Itga1Q3V3R4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itga1Q3V3R4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.52■□□□□ 0.88
Itga1Q3V3R4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Itga1Q3V3R4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Itga1Q3V3R4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Itga1Q3V3R4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Itga1Q3V3R4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.51■□□□□ 0.87
Itga1Q3V3R4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Itga1Q3V3R4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Itga1Q3V3R4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.49■□□□□ 0.87
Itga1Q3V3R4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itga1Q3V3R4 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itga1Q3V3R4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Itga1Q3V3R4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Itga1Q3V3R4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itga1Q3V3R4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms