Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdkl5Q3UTQ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
Cdkl5Q3UTQ8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cdkl5Q3UTQ8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdkl5Q3UTQ8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdkl5Q3UTQ8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Cdkl5Q3UTQ8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Cdkl5Q3UTQ8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdkl5Q3UTQ8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cdkl5Q3UTQ8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdkl5Q3UTQ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdkl5Q3UTQ8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdkl5Q3UTQ8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cdkl5Q3UTQ8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdkl5Q3UTQ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Gm12922-201ENSMUST00000120626 809 ntBASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdkl5Q3UTQ8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cdkl5Q3UTQ8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdkl5Q3UTQ8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Golgb1-201ENSMUST00000023534 498 ntBASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdkl5Q3UTQ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdkl5Q3UTQ8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdkl5Q3UTQ8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Cdkl5Q3UTQ8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cdkl5Q3UTQ8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdkl5Q3UTQ8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdkl5Q3UTQ8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdkl5Q3UTQ8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.14■■□□□ 1.29
Cdkl5Q3UTQ8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Cdkl5Q3UTQ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdkl5Q3UTQ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Cdkl5Q3UTQ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdkl5Q3UTQ8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdkl5Q3UTQ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cdkl5Q3UTQ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms