Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cks1brtQ3UNC9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1brtQ3UNC9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1brtQ3UNC9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1brtQ3UNC9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.46□□□□□ -0.1
Cks1brtQ3UNC9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cks1brtQ3UNC9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cks1brtQ3UNC9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cks1brtQ3UNC9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cks1brtQ3UNC9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cks1brtQ3UNC9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.41□□□□□ -0.1
Cks1brtQ3UNC9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms