Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops9Q3U898 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops9Q3U898 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops9Q3U898 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.78□□□□□ -0.2
Cops9Q3U898 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cops9Q3U898 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.78□□□□□ -0.2
Cops9Q3U898 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops9Q3U898 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops9Q3U898 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops9Q3U898 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops9Q3U898 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.77□□□□□ -0.21
Cops9Q3U898 Mir3960-201ENSMUST00000198213 73 ntBASIC13.77□□□□□ -0.21
Cops9Q3U898 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.77□□□□□ -0.21
Cops9Q3U898 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cops9Q3U898 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.76□□□□□ -0.21
Cops9Q3U898 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.76□□□□□ -0.21
Cops9Q3U898 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cops9Q3U898 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cops9Q3U898 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cops9Q3U898 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.75□□□□□ -0.21
Cops9Q3U898 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.75□□□□□ -0.21
Cops9Q3U898 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops9Q3U898 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cops9Q3U898 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cops9Q3U898 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cops9Q3U898 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops9Q3U898 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms