Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Q3U1D9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Q3U1D9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Gm43060-201ENSMUST00000200621 289 ntBASIC17.4■□□□□ 0.38
Q3U1D9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.4■□□□□ 0.38
Q3U1D9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q3U1D9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.39■□□□□ 0.37
Q3U1D9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Q3U1D9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Q3U1D9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.39■□□□□ 0.37
Q3U1D9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q3U1D9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Q3U1D9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Q3U1D9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.39■□□□□ 0.37
Q3U1D9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q3U1D9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q3U1D9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q3U1D9 Smad6-203ENSMUST00000179458 273 ntBASIC17.38■□□□□ 0.37
Q3U1D9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q3U1D9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.37■□□□□ 0.37
Q3U1D9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Q3U1D9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q3U1D9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Q3U1D9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.36■□□□□ 0.37
Q3U1D9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Q3U1D9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q3U1D9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3U1D9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3U1D9 Gm40848-201ENSMUST00000221998 324 ntBASIC17.35■□□□□ 0.37
Q3U1D9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.35■□□□□ 0.37
Q3U1D9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q3U1D9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q3U1D9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.35■□□□□ 0.37
Q3U1D9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Q3U1D9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q3U1D9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.34■□□□□ 0.37
Q3U1D9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3U1D9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.34■□□□□ 0.37
Q3U1D9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3U1D9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q3U1D9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q3U1D9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q3U1D9 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.33■□□□□ 0.37
Q3U1D9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q3U1D9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.33■□□□□ 0.36
Q3U1D9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Q3U1D9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q3U1D9 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.33■□□□□ 0.36
Q3U1D9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms