Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Gm8495-201ENSMUST00000188740 694 ntBASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Khdc4Q3TCX3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Gm18284-201ENSMUST00000172604 624 ntBASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Gm8493-201ENSMUST00000196881 489 ntBASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Khdc4Q3TCX3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc4Q3TCX3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc4Q3TCX3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc4Q3TCX3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Khdc4Q3TCX3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc4Q3TCX3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc4Q3TCX3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.88■□□□□ 0.61
Khdc4Q3TCX3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms