Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Treml4Q3LRV9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Treml4Q3LRV9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Treml4Q3LRV9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Treml4Q3LRV9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Treml4Q3LRV9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Smad6-203ENSMUST00000179458 273 ntBASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Treml4Q3LRV9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Treml4Q3LRV9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Treml4Q3LRV9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Treml4Q3LRV9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Treml4Q3LRV9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.72■□□□□ 0.59
Treml4Q3LRV9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Treml4Q3LRV9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Treml4Q3LRV9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Treml4Q3LRV9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Treml4Q3LRV9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Treml4Q3LRV9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Treml4Q3LRV9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Treml4Q3LRV9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 AV356131-201ENSMUST00000206201 750 ntBASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.68■□□□□ 0.58
Treml4Q3LRV9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms