Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
Sox4Q06831 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox4Q06831 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox4Q06831 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sox4Q06831 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox4Q06831 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox4Q06831 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sox4Q06831 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sox4Q06831 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox4Q06831 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox4Q06831 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.67■□□□□ 0.74
Sox4Q06831 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.67■□□□□ 0.74
Sox4Q06831 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.67■□□□□ 0.74
Sox4Q06831 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox4Q06831 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.67■□□□□ 0.74
Sox4Q06831 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Sox4Q06831 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Sox4Q06831 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.66■□□□□ 0.74
Sox4Q06831 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox4Q06831 Mir7075-201ENSMUST00000184187 82 ntBASIC19.66■□□□□ 0.74
Sox4Q06831 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox4Q06831 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox4Q06831 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sox4Q06831 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox4Q06831 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox4Q06831 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sox4Q06831 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.65■□□□□ 0.74
Sox4Q06831 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox4Q06831 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox4Q06831 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sox4Q06831 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Gm12251-201ENSMUST00000117893 792 ntBASIC19.63■□□□□ 0.73
Sox4Q06831 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Sox4Q06831 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox4Q06831 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox4Q06831 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox4Q06831 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Sox4Q06831 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.61■□□□□ 0.73
Sox4Q06831 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sox4Q06831 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sox4Q06831 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.61■□□□□ 0.73
Sox4Q06831 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sox4Q06831 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox4Q06831 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.6■□□□□ 0.73
Sox4Q06831 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sox4Q06831 Gm6139-201ENSMUST00000079261 882 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms