Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx3-2P97503 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx3-2P97503 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx3-2P97503 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Nkx3-2P97503 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx3-2P97503 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx3-2P97503 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.83■□□□□ 0.6
Nkx3-2P97503 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.83■□□□□ 0.6
Nkx3-2P97503 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx3-2P97503 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx3-2P97503 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx3-2P97503 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.82■□□□□ 0.6
Nkx3-2P97503 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx3-2P97503 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx3-2P97503 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx3-2P97503 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.8■□□□□ 0.6
Nkx3-2P97503 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Gm8493-201ENSMUST00000196881 489 ntBASIC18.8■□□□□ 0.6
Nkx3-2P97503 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.8■□□□□ 0.6
Nkx3-2P97503 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nkx3-2P97503 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx3-2P97503 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.78■□□□□ 0.6
Nkx3-2P97503 Gm43173-201ENSMUST00000202246 593 ntBASIC18.78■□□□□ 0.6
Nkx3-2P97503 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx3-2P97503 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.78■□□□□ 0.6
Nkx3-2P97503 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx3-2P97503 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx3-2P97503 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx3-2P97503 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx3-2P97503 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx3-2P97503 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx3-2P97503 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx3-2P97503 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms